I will only speak on Navy balance since I am only a UEF only setoner.
TLDR: buff anti hover units or just nerf hover.
- The number one issue with navy balance is that hover spam is a bit overtuned. My main issue with hover spam is that it is a braindead strategy. You simply click drag a line of t2 factories and set the rally point into the enemy navy. There is no skill and no micro. Additionally, the hover units have small hitboxes which makes it difficult for boats to connect salvos. The vision buff to hover tanks was definitely not needed. Anecdotally, I see a lot more setoners spamming hover rather than using torp bombers after the torp nerf.
If you are playing setons then you are guaranteed to see hover spam in almost every game. It is inevitable. The meta feels like it is moving towards where the mid player just makes hover in both ponds instead of making naval units which takes an IQ higher than 50.
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Aeon navy is not overpowered. Aeon navy is very bad against hover units. The Aeon navy has high alpha damage and overkills a lot of hover units. Meanwhile the valiant invests almost all of its DPS into rapid fire surface guns and ignores torp damage so it is a good unit to deal with hover. The Galaxy has a similar high fire rate with low alpha damage and the Seraphim destroyer and battlecruiser have beam weapons that evicerate hover units. Aeon is balanced. No further nerfs are required.
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UEF navy is also balanced correctly. I got to 1900 by only playing UEF on Setons. There is no need to buff UEF. You just need to learn to scout your enemy properly and make the correct counter units. Don't underbuild or over build coopers, valiants, cruisers, frigates, battlecruisers, or battleships. In fact with proper scouting you should always have exactly as many of each as you need. You need to STOP making the same que of 3 valiant, 1 bulwark, 1 cruiser, 1 cooper I see in every low rated game. You need to use your brain and change your unit composition based on what your opponent does.
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T3 Seraphim navy and all of Cybran navy probably need a buff but idk. The Salem is still the worst destroyer.
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Regarding the weird interaction between UEF and Serphim T2 navy. I believe the problem would be solved if the Valiant could ground fire the Seraphim destroyers.
EDIT: I can provide replays where I crush navy with hover spam from mid if the audience so requires.