Currently when you select multiple engineering pods or pod platforms, the "select pod/platform" order (that also allows you to change the auto-assist mode of the pods with a right click) disappears. I suggest that doesn't happen, and that the pod order contracts to a single button when multiple pods/platforms are selected (with a question mark if there's a mix of auto-assist modes, like with stealthed/shielded units).
Behold, a github branch that accomplishes that exact thing:
https://github.com/clyfordv/fa/tree/MultiplePodOrders